STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A139ATW5Uncharacterized protein. (879 aa)    
Predicted Functional Partners:
A0A139A894
WD40 repeat-like protein.
   
 0.975
A0A139A676
TFIID_20kDa domain-containing protein.
    
 0.934
A0A139A9M3
Uncharacterized protein.
    
 0.933
A0A139AAK0
SGF29 C-terminal domain-containing protein.
    
 0.930
A0A139A6B3
Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...]
    
 0.927
A0A138ZXT5
TFIID-31kDa-domain-containing protein.
    
 0.925
A0A139A4X1
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
   
 0.924
A0A139A8A3
Ubiquitin carboxyl-terminal hydrolase.
    
 0.924
A0A139ADK5
WD40 repeat-like protein.
   
 0.924
A0A139AD26
Uncharacterized protein.
    
 0.921
Your Current Organism:
Gonapodya prolifera
NCBI taxonomy Id: 1344416
Other names: G. prolifera JEL478, Gonapodya prolifera JEL478
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.