STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A139AV26Ubiquitin. (62 aa)    
Predicted Functional Partners:
A0A139AR02
Uncharacterized protein.
    
 0.993
A0A139ATW4
P-loop containing nucleoside triphosphate hydrolase protein.
   
 0.985
A0A139AR04
WD40 repeat-like protein.
    
 0.945
A0A139ANG7
HECT domain-containing protein.
   
 0.938
A0A139AEU6
VPS9 domain-containing protein.
    
 0.937
A0A139AZH4
JmjC domain-containing protein.
    
 0.893
A0A139A1F6
Uncharacterized protein.
    
   0.888
A0A139AM16
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
 0.888
A0A139AWQ8
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
 0.888
RPS1
40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family.
   
  0.887
Your Current Organism:
Gonapodya prolifera
NCBI taxonomy Id: 1344416
Other names: G. prolifera JEL478, Gonapodya prolifera JEL478
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.