STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A139AVX05-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family. (226 aa)    
Predicted Functional Partners:
A0A139A6W5
FTHFS-domain-containing protein.
   
 0.894
A0A139AV20
NAD(P)-binding protein.
    
 0.885
A0A139API5
Formyltransferase.
  
 
 0.868
A0A139ASW3
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
  
 0.841
A0A139AXV3
Serine hydroxymethyltransferase; Interconversion of serine and glycine. Belongs to the SHMT family.
  
 0.841
A0A139AI44
Phosphoribosylglycinamide formyltransferase.
   
 0.809
A0A139AKW8
AICARFT/IMPCHase bienzyme.
    
 0.790
A0A139ANN3
Phosphoribosylglycinamide formyltransferase.
   
 0.789
A0A139AKD1
Uncharacterized protein.
    
 0.786
A0A138ZZ12
Glutathione synthetase ATP-binding domain-like protein.
    
 0.733
Your Current Organism:
Gonapodya prolifera
NCBI taxonomy Id: 1344416
Other names: G. prolifera JEL478, Gonapodya prolifera JEL478
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