STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A139AW57RING-type domain-containing protein. (443 aa)    
Predicted Functional Partners:
A0A139AZH4
JmjC domain-containing protein.
   
 0.997
A0A139A204
RING-type domain-containing protein.
    
 0.990
A0A139AN71
Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.
    
 0.816
A0A139AMV0
Pkinase-domain-containing protein; Belongs to the protein kinase superfamily.
    
  0.755
A0A138ZXI9
Rhodanese-like protein.
    
 0.715
A0A139A751
Rhodanese-like protein.
    
 0.715
A0A139AAQ7
Rhodanese-like protein.
    
 0.715
A0A139AC13
Chromo domain-containing protein.
    
 0.715
A0A139AIH5
Chromo domain-containing protein.
    
 0.715
A0A139ATK2
Chromo domain-containing protein.
    
 0.715
Your Current Organism:
Gonapodya prolifera
NCBI taxonomy Id: 1344416
Other names: G. prolifera JEL478, Gonapodya prolifera JEL478
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