STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A139AXY2Uncharacterized protein. (567 aa)    
Predicted Functional Partners:
A0A139B003
Autophagy-related protein.
   
 0.859
A0A139AR04
WD40 repeat-like protein.
    
 0.702
A0A139AML8
Putative ubiquitin.
   
  0.701
A0A139AWK4
NADH:ubiquinone oxidoreductase complex I intermediate-associated protein 30.
   
  0.701
A0A139AWM1
CIA30-domain-containing protein.
   
  0.701
A0A139AEQ7
Autophagy protein 5; Involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation.
    
 0.694
A0A139APN2
Uncharacterized protein.
   
 0.693
A0A139A872
Uncharacterized protein.
    
 0.670
A0A139A9R2
HTH La-type RNA-binding domain-containing protein.
    
 0.670
A0A139AS14
BTB domain-containing protein.
    
 0.670
Your Current Organism:
Gonapodya prolifera
NCBI taxonomy Id: 1344416
Other names: G. prolifera JEL478, Gonapodya prolifera JEL478
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