STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A139AZL5DEAD-domain-containing protein; Belongs to the DEAD box helicase family. (407 aa)    
Predicted Functional Partners:
TIF34
Eukaryotic translation initiation factor 3 subunit I; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.
   
 
 0.985
A0A139ANS2
Eukaryotic translation initiation factor 4E; Belongs to the eukaryotic initiation factor 4E family.
   
 0.980
A0A139ALC2
ARM repeat-containing protein.
   
 0.972
A0A139AYK3
Glycosyltransferase family 69 protein.
   
 0.972
A0A139AED8
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
 0.967
A0A139B0F9
Guanine nucleotide binding protein beta subunit.
   
 
 0.964
PRT1
Eukaryotic translation initiation factor 3 subunit B; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.
   
 
 0.961
A0A139A7M7
S1 motif domain-containing protein.
   
 0.958
A0A139AS84
RNA-binding domain-containing protein.
 
 
 0.957
RPS1
40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family.
 
 
 0.950
Your Current Organism:
Gonapodya prolifera
NCBI taxonomy Id: 1344416
Other names: G. prolifera JEL478, Gonapodya prolifera JEL478
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.