STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A139B0M2Uncharacterized protein. (306 aa)    
Predicted Functional Partners:
A0A139AND5
Ribosomal_L2_C domain-containing protein.
   
 
 0.883
A0A139AXP0
Uncharacterized protein.
   
 
 0.881
A0A139AMB9
Ribosomal protein S2.
  
 
 0.873
A0A139APD4
Uncharacterized protein.
   
 
 0.872
A0A139AJI6
Uncharacterized protein.
   
 
 0.868
A0A139AS15
Ribosomal protein L4.
   
 
 0.867
A0A139AEB4
Ribonuclease III.
   
 
 0.864
A0A139AJY5
Nudix hydrolase domain-containing protein.
   
 
 0.864
A0A139AKF8
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
   
   0.861
A0A139AYY2
Uncharacterized protein; Belongs to the universal ribosomal protein uS15 family.
   
   0.858
Your Current Organism:
Gonapodya prolifera
NCBI taxonomy Id: 1344416
Other names: G. prolifera JEL478, Gonapodya prolifera JEL478
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.