STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1D2VA08RIBOSOMAL_L9 domain-containing protein. (299 aa)    
Predicted Functional Partners:
A0A1D2VPW7
Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
  
 0.955
A0A1D2VQV5
Triosephosphate isomerase.
  
 
 0.935
A0A1D2VIK5
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.904
A0A1D2V9U9
Glyceraldehyde-3-phosphate dehydrogenase.
  
 0.863
A0A1D2VPI3
Glyceraldehyde-3-phosphate dehydrogenase.
  
 0.863
A0A1D2V8A6
Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.
  
 
 0.845
A0A1D2VE33
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.
  
 
 0.807
A0A1D2VMQ3
annotation not available
  
 0.776
A0A1D2VNX0
annotation not available
  
 0.776
A0A1D2VKB4
Pyruvate decarboxylase isozyme 1.
   
 
 0.773
Your Current Organism:
Ascoidea rubescens
NCBI taxonomy Id: 1344418
Other names: A. rubescens DSM 1968, Ascoidea rubescens DSM 1968
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