STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1D2VA36GATA-type domain-containing protein. (533 aa)    
Predicted Functional Partners:
A0A1D2VSC7
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
  0.636
A0A1D2VPU1
Nuclear SAM-dependent mono-and asymmetric arginine dimethylating methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family.
    
 0.620
A0A1D2VE73
Histone H2A; Belongs to the histone H2A family.
    
 0.618
A0A1D2VAQ2
Uncharacterized protein.
    
 0.595
A0A1D2VE56
BTB domain-containing protein.
    
 0.591
A0A1D2VPN3
TATA-box binding protein.
    
 0.591
A0A1D2VFS1
SRF-TF-domain-containing protein.
    
 0.589
A0A1D2VB18
RhoGAP-domain-containing protein.
    
 0.587
A0A1D2VB67
LIM zinc-binding domain-containing protein.
    
 0.587
A0A1D2VG35
Cysteine proteinase.
    
  0.566
Your Current Organism:
Ascoidea rubescens
NCBI taxonomy Id: 1344418
Other names: A. rubescens DSM 1968, Ascoidea rubescens DSM 1968
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.