STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1D2VB27DUF663-domain-containing protein. (1182 aa)    
Predicted Functional Partners:
A0A1D2VAG9
18S rRNA biogenesis protein.
   
 0.999
A0A1D2VBB9
Nop14-like protein.
   
 
 0.999
NAT10
RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.
   
 
 0.999
A0A1D2VM77
WD40 repeat-like protein.
   
 
 0.999
A0A1D2VPC6
Utp21-domain-containing protein.
   
 
 0.999
A0A1D2V876
Sas10 domain-containing protein.
   
 
 0.998
A0A1D2VA17
Uncharacterized protein.
   
 
 0.998
A0A1D2VAQ4
WD40 repeat-like protein.
   
 
 0.998
A0A1D2VAR4
WD40 repeat-like protein.
   
 0.998
A0A1D2VAT1
WD40 repeat-like protein.
   
 
 0.998
Your Current Organism:
Ascoidea rubescens
NCBI taxonomy Id: 1344418
Other names: A. rubescens DSM 1968, Ascoidea rubescens DSM 1968
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