STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1D2VC30RRM Nup35-type domain-containing protein. (854 aa)    
Predicted Functional Partners:
A0A1D2VPQ4
Nup188_C domain-containing protein.
    
 
 0.863
A0A1D2VRD7
Nuclear pore protein.
    
 
 0.853
A0A1D2VP09
Nucleoporin-domain-containing protein.
    
 0.845
A0A1D2VM26
Uncharacterized protein.
    
 
 0.798
A0A1D2VA21
Nsp1_C domain-containing protein.
    
 
 0.763
A0A1D2VDF4
ARM repeat-containing protein.
   
 
 0.760
A0A1D2VF14
ARM repeat-containing protein.
   
 
 0.760
A0A1D2VMD5
Nup54 domain-containing protein.
    
 
 0.759
A0A1D2VLD3
Uncharacterized protein.
    
 
 0.758
A0A1D2VF12
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
    
 
 0.757
Your Current Organism:
Ascoidea rubescens
NCBI taxonomy Id: 1344418
Other names: A. rubescens DSM 1968, Ascoidea rubescens DSM 1968
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.