STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1D2VC52Tr-type G domain-containing protein. (997 aa)    
Predicted Functional Partners:
A0A1D2VFX5
RNase_PH domain-containing protein.
    
 0.994
A0A1D2VNC4
Protein DOM34 homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs.
   
 
 0.989
A0A1D2VQS6
Exosome complex exonuclease RRP44; Belongs to the RNR ribonuclease family.
   
 0.985
A0A1D2VM66
EXOSC1 domain-containing protein.
    
 0.980
A0A1D2VLX6
Exosome complex exonuclease RRP40.
    
 0.979
A0A1D2VGC1
RNase_PH domain-containing protein.
    
 0.970
A0A1D2V9L9
Ribosomal protein S5 domain 2-like protein.
   
 0.967
A0A1D2VDE2
Uncharacterized protein.
    
 0.966
A0A1D2VDE9
Ribosomal protein S5 domain 2-like protein.
    
 0.966
A0A1D2VLV4
RNase_PH domain-containing protein.
    
 0.949
Your Current Organism:
Ascoidea rubescens
NCBI taxonomy Id: 1344418
Other names: A. rubescens DSM 1968, Ascoidea rubescens DSM 1968
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