STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1D2VC63Uncharacterized protein. (574 aa)    
Predicted Functional Partners:
A0A1D2V8L8
SRP72 domain-containing protein.
   
 0.999
A0A1D2VC25
SRP19-domain-containing protein.
    
 0.999
A0A1D2VH46
SRP9-21 domain-containing protein.
   
 0.999
A0A1D2VI08
Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily.
    
 0.999
A0A1D2VL47
Signal recognition particle, SRP9/SRP14 subunit.
    
 0.999
A0A1D2VQN1
P-loop containing nucleoside triphosphate hydrolase protein.
   
 0.945
A0A1D2VGX9
P-loop containing nucleoside triphosphate hydrolase protein.
   
 
 0.921
A0A1D2VIK3
60S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
    
 
 0.883
A0A1D2VKC3
Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.
   
 
 0.878
A0A1D2VAZ5
Ribosomal_L2_C domain-containing protein.
   
   0.866
Your Current Organism:
Ascoidea rubescens
NCBI taxonomy Id: 1344418
Other names: A. rubescens DSM 1968, Ascoidea rubescens DSM 1968
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