STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1D2VCR2Lactamase_B_4 domain-containing protein. (937 aa)    
Predicted Functional Partners:
A0A1D2VB89
Endonuclease.
   
   0.949
A0A1D2VCY1
Metallo-hydrolase/oxidoreductase.
    
 0.759
A0A1D2VAQ4
WD40 repeat-like protein.
   
    0.735
A0A1D2VM85
P-loop containing nucleoside triphosphate hydrolase protein.
   
  
 0.725
A0A1D2VN16
HRDC domain-containing protein.
   
 
 0.689
A0A1D2VGV8
Exosome exoribonuclease.
  
 
 0.670
A0A1D2VDE9
Ribosomal protein S5 domain 2-like protein.
  
 
 0.669
A0A1D2VGC1
RNase_PH domain-containing protein.
  
 
 0.669
A0A1D2VHY0
Thiamin pyrophosphokinase.
    
  0.668
A0A1D2VJX8
tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRM61; Catalytic subunit of tRNA (adenine-N(1)-)-methyltransferase, which catalyzes the formation of N(1)-methyladenine at position 58 (m1A58) in initiator methionyl-tRNA.
  
  
 0.601
Your Current Organism:
Ascoidea rubescens
NCBI taxonomy Id: 1344418
Other names: A. rubescens DSM 1968, Ascoidea rubescens DSM 1968
Server load: low (26%) [HD]