STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1D2VD29Uncharacterized protein. (127 aa)    
Predicted Functional Partners:
A0A1D2VHE6
Uncharacterized protein.
   
    0.852
A0A1D2VRS5
DUF947-domain-containing protein.
   
  
 0.756
A0A1D2VAR1
Uncharacterized protein.
   
    0.737
A0A1D2V8V8
Uncharacterized protein.
   
    0.734
A0A1D2VIR7
Ebp2-domain-containing protein.
   
  
 0.592
A0A1D2VRM6
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
   0.581
A0A1D2VEN3
rRNA-processing protein; Involved in nucleolar integrity and required for processing of the pre-rRNA for the 60S ribosome subunit. Belongs to the CGR1 family.
   
    0.569
A0A1D2V9U4
G-patch domain-containing protein.
   
    0.539
SPB1
AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily.
   
  
 0.522
A0A1D2VI67
Uncharacterized protein.
   
   0.517
Your Current Organism:
Ascoidea rubescens
NCBI taxonomy Id: 1344418
Other names: A. rubescens DSM 1968, Ascoidea rubescens DSM 1968
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.