STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1D2VGN1J domain-containing protein. (254 aa)    
Predicted Functional Partners:
A0A1D2V9Z7
Cwf21 domain-containing protein.
    
  0.640
A0A1D2VEA0
Phosphoadenosine phosphosulfate reductase.
 
      0.629
A0A1D2VBE9
PWI domain-containing protein.
   
 
  0.603
A0A1D2VCV0
U1-type domain-containing protein.
    
   0.581
A0A1D2VM04
Rick_17kDa_Anti domain-containing protein.
   
 
  0.534
A0A1D2VM12
Rick_17kDa_Anti domain-containing protein.
   
 
  0.534
A0A1D2V9J6
P68 RNA helicase; Belongs to the DEAD box helicase family.
    
  0.500
A0A1D2VS40
DEAD-domain-containing protein; Belongs to the DEAD box helicase family.
    
  0.500
A0A1D2VG63
Putative vacuolar ATP synthase proteolipid subunit; Belongs to the V-ATPase proteolipid subunit family.
 
      0.475
A0A1D2VPR4
Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
 
      0.456
Your Current Organism:
Ascoidea rubescens
NCBI taxonomy Id: 1344418
Other names: A. rubescens DSM 1968, Ascoidea rubescens DSM 1968
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.