A0A1D2VGW3 protein (Ascoidea rubescens) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A1D2VGW3

FAD/NAD(P)-binding domain-containing protein. (525 aa)

Predicted Functional Partners:

A0A1D2VHI2

0.604

A0A1D2VJS2

0.580

A0A1D2VJX2

0.580

A0A1D2VMQ7

0.580

A0A1D2VPZ4

0.580

COQ3

0.519

A0A1D2VLM2

0.518

A0A1D2V8H0

0.516

A0A1D2VK38

0.513

A0A1D2VAQ7

0.503

Your Current Organism:

Ascoidea rubescens

NCBI taxonomy Id: 1344418
Other names: A. rubescens DSM 1968, Ascoidea rubescens DSM 1968

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A1D2V8H0	A0A1D2VAQ7	A0A1D2V8H0	A0A1D2VAQ7	Subunit B of the stator stalk of mitochondrial F1F0 ATP synthase.	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.999
A0A1D2V8H0	A0A1D2VGW3	A0A1D2V8H0	A0A1D2VGW3	Subunit B of the stator stalk of mitochondrial F1F0 ATP synthase.	FAD/NAD(P)-binding domain-containing protein.	0.516
A0A1D2V8H0	A0A1D2VK38	A0A1D2V8H0	A0A1D2VK38	Subunit B of the stator stalk of mitochondrial F1F0 ATP synthase.	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.999
A0A1D2VAQ7	A0A1D2V8H0	A0A1D2VAQ7	A0A1D2V8H0	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	Subunit B of the stator stalk of mitochondrial F1F0 ATP synthase.	0.999
A0A1D2VAQ7	A0A1D2VGW3	A0A1D2VAQ7	A0A1D2VGW3	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	FAD/NAD(P)-binding domain-containing protein.	0.503
A0A1D2VAQ7	A0A1D2VK38	A0A1D2VAQ7	A0A1D2VK38	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.999
A0A1D2VAQ7	A0A1D2VLM2	A0A1D2VAQ7	A0A1D2VLM2	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	Tr-type G domain-containing protein.	0.857
A0A1D2VGW3	A0A1D2V8H0	A0A1D2VGW3	A0A1D2V8H0	FAD/NAD(P)-binding domain-containing protein.	Subunit B of the stator stalk of mitochondrial F1F0 ATP synthase.	0.516
A0A1D2VGW3	A0A1D2VAQ7	A0A1D2VGW3	A0A1D2VAQ7	FAD/NAD(P)-binding domain-containing protein.	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.503
A0A1D2VGW3	A0A1D2VHI2	A0A1D2VGW3	A0A1D2VHI2	FAD/NAD(P)-binding domain-containing protein.	Uncharacterized protein.	0.604
A0A1D2VGW3	A0A1D2VJS2	A0A1D2VGW3	A0A1D2VJS2	FAD/NAD(P)-binding domain-containing protein.	Uncharacterized protein.	0.580
A0A1D2VGW3	A0A1D2VJX2	A0A1D2VGW3	A0A1D2VJX2	FAD/NAD(P)-binding domain-containing protein.	Alpha/beta-hydrolase.	0.580
A0A1D2VGW3	A0A1D2VK38	A0A1D2VGW3	A0A1D2VK38	FAD/NAD(P)-binding domain-containing protein.	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.513
A0A1D2VGW3	A0A1D2VLM2	A0A1D2VGW3	A0A1D2VLM2	FAD/NAD(P)-binding domain-containing protein.	Tr-type G domain-containing protein.	0.518
A0A1D2VGW3	A0A1D2VMQ7	A0A1D2VGW3	A0A1D2VMQ7	FAD/NAD(P)-binding domain-containing protein.	Uncharacterized protein.	0.580
A0A1D2VGW3	A0A1D2VPZ4	A0A1D2VGW3	A0A1D2VPZ4	FAD/NAD(P)-binding domain-containing protein.	Zn(2)-C6 fungal-type domain-containing protein.	0.580
A0A1D2VGW3	COQ3	A0A1D2VGW3	A0A1D2VRI9	FAD/NAD(P)-binding domain-containing protein.	Ubiquinone biosynthesis O-methyltransferase, mitochondrial; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the class I-like SAM-binding methyltransferase superfamily. UbiG/COQ3 family.	0.519
A0A1D2VHI2	A0A1D2VGW3	A0A1D2VHI2	A0A1D2VGW3	Uncharacterized protein.	FAD/NAD(P)-binding domain-containing protein.	0.604
A0A1D2VHI2	COQ3	A0A1D2VHI2	A0A1D2VRI9	Uncharacterized protein.	Ubiquinone biosynthesis O-methyltransferase, mitochondrial; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the class I-like SAM-binding methyltransferase superfamily. UbiG/COQ3 family.	0.515
A0A1D2VJS2	A0A1D2VGW3	A0A1D2VJS2	A0A1D2VGW3	Uncharacterized protein.	FAD/NAD(P)-binding domain-containing protein.	0.580