STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1D2VH83MATE efflux family protein. (516 aa)    
Predicted Functional Partners:
A0A1D2VN15
SAM-dependent MTase TRM10-type domain-containing protein.
   
 0.754
A0A1D2VA77
Farnesyl-diphosphate farnesyltransferase.
   
 
 0.591
A0A1D2VKV5
MATE efflux family protein.
  
  
 
0.545
A0A1D2VE56
BTB domain-containing protein.
   
  
 0.514
A0A1D2VPN3
TATA-box binding protein.
   
  
 0.514
A0A1D2VGT5
POPLD-domain-containing protein.
   
 
 0.512
A0A1D2VRV0
TPR-like protein.
  
    0.511
A0A1D2VQD5
Uncharacterized protein.
   
 
 0.508
A0A1D2VN09
Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends. Belongs to the eukaryotic/archaeal RNase P protein component 2 family.
     
 0.506
A0A1D2VG56
Ribosomal_L18_c domain-containing protein.
     
 0.477
Your Current Organism:
Ascoidea rubescens
NCBI taxonomy Id: 1344418
Other names: A. rubescens DSM 1968, Ascoidea rubescens DSM 1968
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