STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1D2VHB8Uncharacterized protein. (1236 aa)    
Predicted Functional Partners:
A0A1D2VLZ3
SUMO-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.
   
 
 0.961
A0A1D2VPB8
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
    
 
 0.929
A0A1D2VA23
Purine biosynthetic pathway protein ADE5,7.
   
 0.859
A0A1D2VDM4
Phosphoribosylglycinamide formyltransferase.
   
 0.859
A0A1D2VC14
Translation initiation factor eIF1A; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits.
    
 
 0.853
A0A1D2VJ64
Eukaryotic translation initiation factor 5A.
    
 
 0.761
A0A1D2VPJ3
Sec39 domain-containing protein.
    
 
 0.623
A0A1D2VPZ2
ARM repeat-containing protein.
   
  
 0.540
A0A1D2VA21
Nsp1_C domain-containing protein.
   
 
 0.534
A0A1D2VM42
Uncharacterized protein.
   
 
 0.534
Your Current Organism:
Ascoidea rubescens
NCBI taxonomy Id: 1344418
Other names: A. rubescens DSM 1968, Ascoidea rubescens DSM 1968
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