STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1D2VK34RNA polymerase I-specific transcription initiation factor RRN3. (772 aa)    
Predicted Functional Partners:
A0A1D2VP88
Uncharacterized protein.
   
 0.997
A0A1D2VNI1
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.996
A0A1D2VA40
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.995
A0A1D2VEX4
RNA polymerase I associated factor, A49-like protein.
   
 0.990
A0A1D2VBF4
Putative DNA-directed RNA polymerases I and III subunit.
   
 0.989
A0A1D2VKQ3
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
   
 0.982
A0A1D2VJF2
RNA polymerase Rpb6.
   
 0.979
A0A1D2VSH7
RNA polymerase I, subunit RPA34.5.
   
 0.975
A0A1D2V956
DNA-directed RNA polymerases I and III 14 kDa polypeptide.
   
 0.972
A0A1D2VRP1
DNA-directed RNA polymerases II 24 kDa polypeptide.
    
 0.963
Your Current Organism:
Ascoidea rubescens
NCBI taxonomy Id: 1344418
Other names: A. rubescens DSM 1968, Ascoidea rubescens DSM 1968
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