STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1D2VKI4Uncharacterized protein. (651 aa)    
Predicted Functional Partners:
A0A1D2V9Z8
TPR-like protein.
    
 0.668
A0A1D2VA11
RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.
    
  0.646
A0A1D2VL73
Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family.
    
  0.639
A0A1D2VN78
RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.633
A0A1D2V9I6
Translational machinery component.
    
  0.630
A0A1D2VES8
Uncharacterized protein; Belongs to the universal ribosomal protein uS2 family.
   
  0.621
A0A1D2V9U0
Uncharacterized protein.
    
  0.620
A0A1D2V9Z3
Ribosomal protein S16.
   
  0.620
A0A1D2VRE8
Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.
    
  0.620
A0A1D2VLH2
S15/NS1 RNA-binding domain-containing protein; Belongs to the universal ribosomal protein uS15 family.
   
  0.618
Your Current Organism:
Ascoidea rubescens
NCBI taxonomy Id: 1344418
Other names: A. rubescens DSM 1968, Ascoidea rubescens DSM 1968
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