STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1D2VLH5Uncharacterized protein. (2207 aa)    
Predicted Functional Partners:
A0A1D2VPN3
TATA-box binding protein.
    
 
 0.989
A0A1D2VEB4
Histone-fold-containing protein.
    
 
 0.915
A0A1D2VE56
BTB domain-containing protein.
    
 
 0.885
A0A1D2VLI3
Histone-fold-containing protein.
    
 
 0.872
A0A1D2VL52
TFIID-18kDa-domain-containing protein.
    
 
 0.626
A0A1D2VMX2
Uncharacterized protein.
   
  
 0.626
A0A1D2VRN7
PHD-type domain-containing protein.
   
 
 0.605
A0A1D2VPD7
Uncharacterized protein.
  
 
0.601
A0A1D2VDN9
Uncharacterized protein.
  
 
0.590
A0A1D2VBL8
Transcription factor TFIIB, a general transcription factor.
    
 
 0.572
Your Current Organism:
Ascoidea rubescens
NCBI taxonomy Id: 1344418
Other names: A. rubescens DSM 1968, Ascoidea rubescens DSM 1968
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.