STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1D2VNJ4Histone deacetylase 8-like protein. (361 aa)    
Predicted Functional Partners:
A0A1D2VM45
Uncharacterized protein.
    
 0.905
A0A1D2VQG0
WD40 repeat-like protein.
   
 0.904
A0A1D2VIX5
MRG-domain-containing protein.
    
 0.902
A0A1D2VA32
Histone acetyltransferase subunit.
   
 0.858
A0A1D2VCV3
WD40 repeat-like protein.
   
 0.858
A0A1D2VIW8
Amine oxidase.
   
 0.850
A0A1D2VKE2
SANT domain-containing protein.
    
 0.847
A0A1D2VC74
PHD domain-containing protein.
    
 0.839
A0A1D2VIT8
WD40 repeat-like protein.
   
 0.838
A0A1D2V974
Uncharacterized protein.
    
 0.826
Your Current Organism:
Ascoidea rubescens
NCBI taxonomy Id: 1344418
Other names: A. rubescens DSM 1968, Ascoidea rubescens DSM 1968
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.