STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1D2VPC9Uncharacterized protein. (474 aa)    
Predicted Functional Partners:
A0A1D2VKR7
Tryptophan synthase.
     
 0.785
A0A1D2VS99
Tryptophan synthase.
     
 0.785
A0A1D2VQH8
Ribosomal protein L37; Binds to the 23S rRNA.
    
 0.764
A0A1D2VC84
Uncharacterized protein.
   
 0.677
A0A1D2VPX6
WD40 repeat-like protein; Belongs to the WD repeat SEC13 family.
    
 0.677
A0A1D2VD17
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
    
 0.673
A0A1D2VS46
WD40 repeat-like protein; Belongs to the WD repeat SEC13 family.
    
 0.650
A0A1D2VF12
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
    
 0.649
A0A1D2VAJ2
Uncharacterized protein.
  
 0.605
A0A1D2VHV1
Aldo/keto reductase.
  
 0.605
Your Current Organism:
Ascoidea rubescens
NCBI taxonomy Id: 1344418
Other names: A. rubescens DSM 1968, Ascoidea rubescens DSM 1968
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