STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F989_00720Unannotated protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection. (109 aa)    
Predicted Functional Partners:
recR
Unannotated protein; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.
 
  
 0.987
metZ
Unannotated protein; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide.
       0.857
F989_00718
Unannotated protein.
       0.724
F989_00717
Unannotated protein.
       0.724
F989_00722
Unannotated protein.
       0.611
yajC
Unannotated protein; The SecYEG-SecDF-YajC-YidC holo-translocon (HTL) protein secretase/insertase is a supercomplex required for protein secretion, insertion of proteins into membranes, and assembly of membrane protein complexes. While the SecYEG complex is essential for assembly of a number of proteins and complexes, the SecDF-YajC-YidC subcomplex facilitates these functions.
  
 
  0.586
dnaX
Unannotated protein; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.
  
  
 0.583
F989_00724
Unannotated protein.
       0.571
F989_00723
Unannotated protein.
       0.571
F989_00725
Unannotated protein.
  
    0.562
Your Current Organism:
Acinetobacter parvus
NCBI taxonomy Id: 134533
Other names: A. parvus, Acinetobacter Phenon 4, Acinetobacter parvus Nemec et al. 2003, Acinetobacter sp. phenon 4, CCM 7030, CCUG 48800, DSM 16617, LMG 21765, LMG:21765, LUH 4616, NIPH 384
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.