STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NG55_05800Benzene 1,2-dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (163 aa)    
Predicted Functional Partners:
antC
Anthranilate dioxygenase reductase; Catalyzes the formation of catechol from anthranilate; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.999
NG55_05805
Anthranilate 1,2-dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
NG55_13300
Benzene 1,2-dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.955
NG55_05130
Rieske (2Fe-2S) protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.948
NG55_13310
NADH oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.907
NG55_05065
Muconolactone delta-isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the muconolactone Delta-isomerase family.
 
  
 0.848
NG55_03160
Dioxygenase; Converts carnitine to trimethylamine and malic semialdehyde.
 
 0.839
NG55_05070
mRNA 3'-end processing factor; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.837
NG55_16270
2Fe-2S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.828
NG55_07365
3-phenylpropionate dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.814
Your Current Organism:
Acinetobacter gyllenbergii
NCBI taxonomy Id: 134534
Other names: A. gyllenbergii, Acinetobacter gyllenbergii Nemec et al. 2009, Acinetobacter sp. NIPH 2021, Acinetobacter sp. NIPH 2022, Acinetobacter sp. NIPH 2150, Acinetobacter sp. NIPH 230, Acinetobacter sp. NIPH 2353, Acinetobacter sp. NIPH 802, Acinetobacter sp. NIPH 822, Acinetobacter sp. NIPH 975, Acinetobacter sp. phenon 3, CCM 7267, CCUG 51248, DSM 22705, NIPH 2150, RUH 422
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