STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NG55_12225GDSL family lipase; Derived by automated computational analysis using gene prediction method: Protein Homology. (209 aa)    
Predicted Functional Partners:
NG55_12215
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.943
NG55_12220
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.808
NG55_15430
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.733
NG55_20300
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.702
NG55_04140
Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.697
NG55_15390
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.697
NG55_16205
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.697
NG55_16220
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 0.697
NG55_20315
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
   
 0.697
NG55_20345
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.697
Your Current Organism:
Acinetobacter gyllenbergii
NCBI taxonomy Id: 134534
Other names: A. gyllenbergii, Acinetobacter gyllenbergii Nemec et al. 2009, Acinetobacter sp. NIPH 2021, Acinetobacter sp. NIPH 2022, Acinetobacter sp. NIPH 2150, Acinetobacter sp. NIPH 230, Acinetobacter sp. NIPH 2353, Acinetobacter sp. NIPH 802, Acinetobacter sp. NIPH 822, Acinetobacter sp. NIPH 975, Acinetobacter sp. phenon 3, CCM 7267, CCUG 51248, DSM 22705, NIPH 2150, RUH 422
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.