STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NG55_16725ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (458 aa)    
Predicted Functional Partners:
NG55_16730
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.699
NG55_11865
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.567
NG55_15795
Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.559
NG55_09575
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
   0.489
NG55_00340
Polyketide cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.452
NG55_01660
Polyketide cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.450
NG55_12245
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.450
NG55_19225
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.444
NG55_10650
Type 4 pili biogenesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.442
prmB
SAM-dependent methyltransferase; Specifically methylates the 50S ribosomal protein L3 on a specific glutamine residue; Belongs to the protein N5-glutamine methyltransferase family. PrmB subfamily.
  
    0.427
Your Current Organism:
Acinetobacter gyllenbergii
NCBI taxonomy Id: 134534
Other names: A. gyllenbergii, Acinetobacter gyllenbergii Nemec et al. 2009, Acinetobacter sp. NIPH 2021, Acinetobacter sp. NIPH 2022, Acinetobacter sp. NIPH 2150, Acinetobacter sp. NIPH 230, Acinetobacter sp. NIPH 2353, Acinetobacter sp. NIPH 802, Acinetobacter sp. NIPH 822, Acinetobacter sp. NIPH 975, Acinetobacter sp. phenon 3, CCM 7267, CCUG 51248, DSM 22705, NIPH 2150, RUH 422
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.