STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NG55_18950Spore coat protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (365 aa)    
Predicted Functional Partners:
NG55_18955
Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.993
NG55_18960
N-acetylneuraminate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.987
NG55_18940
Spore coat protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.967
NG55_18935
UDP-4-dehydro-6-deoxy-2-acetamido-D-glucose 4-reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.961
NG55_18945
NeuA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.955
NG55_18970
Capsular biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.918
NG55_18965
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.909
NG55_18975
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.610
NG55_09705
Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.579
NG55_03875
Ribosomal-protein-alanine N-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.525
Your Current Organism:
Acinetobacter gyllenbergii
NCBI taxonomy Id: 134534
Other names: A. gyllenbergii, Acinetobacter gyllenbergii Nemec et al. 2009, Acinetobacter sp. NIPH 2021, Acinetobacter sp. NIPH 2022, Acinetobacter sp. NIPH 2150, Acinetobacter sp. NIPH 230, Acinetobacter sp. NIPH 2353, Acinetobacter sp. NIPH 802, Acinetobacter sp. NIPH 822, Acinetobacter sp. NIPH 975, Acinetobacter sp. phenon 3, CCM 7267, CCUG 51248, DSM 22705, NIPH 2150, RUH 422
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.