STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NG55_19480Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (198 aa)    
Predicted Functional Partners:
NG55_19475
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.828
NG55_19485
Ion channel; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.668
NG55_14480
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.546
NG55_07390
Polyketide cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.541
NG55_19225
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.451
NG55_00175
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.450
NG55_10810
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.442
NG55_04945
Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.431
NG55_02655
Metal-dependent hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.426
NG55_20105
LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.
  
 
   0.402
Your Current Organism:
Acinetobacter gyllenbergii
NCBI taxonomy Id: 134534
Other names: A. gyllenbergii, Acinetobacter gyllenbergii Nemec et al. 2009, Acinetobacter sp. NIPH 2021, Acinetobacter sp. NIPH 2022, Acinetobacter sp. NIPH 2150, Acinetobacter sp. NIPH 230, Acinetobacter sp. NIPH 2353, Acinetobacter sp. NIPH 802, Acinetobacter sp. NIPH 822, Acinetobacter sp. NIPH 975, Acinetobacter sp. phenon 3, CCM 7267, CCUG 51248, DSM 22705, NIPH 2150, RUH 422
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.