STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OI25_1209Mce related family protein; [Q] COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component. (324 aa)    
Predicted Functional Partners:
OI25_1210
ABC transporter family protein; [Q] COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component.
 
 0.997
OI25_1211
[Q] COG0767 ABC-type transport system involved in resistance to organic solvents, permease component.
 
 0.996
OI25_1838
[Q] COG0767 ABC-type transport system involved in resistance to organic solvents, permease component.
  
 0.965
OI25_1837
ABC transporter family protein; [Q] COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component.
  
 0.958
OI25_1208
Hypothetical protein.
 
   0.951
mlaD
OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD; [Q] COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component.
     
 0.912
OI25_1841
Toluene tolerance, Ttg2 family protein; [Q] COG2854 ABC-type transport system involved in resistance to organic solvents, auxiliary component.
  
 0.907
OI25_5484
Toluene tolerance, Ttg2 family protein; [Q] COG2854 ABC-type transport system involved in resistance to organic solvents, auxiliary component.
  
 0.907
OI25_1842
STAS domain protein; [R] COG3113 Predicted NTP binding protein (contains STAS domain).
 
 0.898
OI25_1207
vanZ like family protein; [S] COG5652 Predicted integral membrane protein.
       0.644
Your Current Organism:
Paraburkholderia fungorum
NCBI taxonomy Id: 134537
Other names: ATCC BAA-463, Burkholderia fungorum, Burkholderia fungorum Coenye et al. 2001, Burkholderia sp. LMG 16225, Burkholderia sp. LMG 16307, Burkholderia sp. LMG16225, Burkholderia sp. LMG16307, CCUG 31961, CIP 107096, DSM 17061, JCM 21562, LMG 16225, LMG:16225, NBRC 102489, P. fungorum, Paraburkholderia fungorum (Coenye et al. 2001) Sawana et al. 2015, strain Croize P763-2
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