STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OI25_1694folB_dom: FolB domain protein; [H] COG1539 Dihydroneopterin aldolase. (131 aa)    
Predicted Functional Partners:
folP
DHPS: dihydropteroate synthase; [H] COG0294 Dihydropteroate synthase and related enzymes.
  
 
 0.991
folK
folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase; [H] COG0801 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase.
  
 
 0.991
OI25_5796
[H] COG0302 GTP cyclohydrolase I.
  
  
 0.842
folE
folE: GTP cyclohydrolase I; [H] COG0302 GTP cyclohydrolase I.
  
  
 0.842
ttcA
PP-loop family protein; Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine/cysteine desulfurase (IscS) system.
  
    0.820
OI25_1693
Short chain dehydrogenase family protein; [IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
 
   
 0.790
folC
folC: bifunctional FolC family protein; [H] COG0285 Folylpolyglutamate synthase; Belongs to the folylpolyglutamate synthase family.
 
  
 0.714
OI25_5317
Hypothetical protein.
  
     0.686
OI25_1842
STAS domain protein; [R] COG3113 Predicted NTP binding protein (contains STAS domain).
  
     0.676
OI25_2125
Hypothetical protein.
  
     0.663
Your Current Organism:
Paraburkholderia fungorum
NCBI taxonomy Id: 134537
Other names: ATCC BAA-463, Burkholderia fungorum, Burkholderia fungorum Coenye et al. 2001, Burkholderia sp. LMG 16225, Burkholderia sp. LMG 16307, Burkholderia sp. LMG16225, Burkholderia sp. LMG16307, CCUG 31961, CIP 107096, DSM 17061, JCM 21562, LMG 16225, LMG:16225, NBRC 102489, P. fungorum, Paraburkholderia fungorum (Coenye et al. 2001) Sawana et al. 2015, strain Croize P763-2
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