STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OI25_2550ABC transporter family protein; [V] COG1132 ABC-type multidrug transport system, ATPase and permease components. (625 aa)    
Predicted Functional Partners:
OI25_6185
ABC transporter family protein; [V] COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain.
 
 
0.788
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
 
 0.684
OI25_5522
Carbohydrate kinase, FGGY family; [O] COG0443 Molecular chaperone; Belongs to the heat shock protein 70 family.
 
 0.577
OI25_4882
ABC transporter family protein; [O] COG5265 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components.
  
 
0.569
OI25_1036
ABC transporter family protein; [O] COG5265 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components.
  
 
0.544
OI25_4338
Hypothetical protein.
 
   
 0.542
hscA
Fe-S protein assembly chaperone HscA; Chaperone involved in the maturation of iron-sulfur cluster- containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by HscB.
 
 0.494
OI25_4627
ABC transporter family protein; [V] COG1131 ABC-type multidrug transport system, ATPase component.
 
0.493
OI25_6685
Tetratricopeptide repeat family protein; [R] COG0457 FOG: TPR repeat.
 
 
 0.485
OI25_1843
ABC transporter family protein; [V] COG1131 ABC-type multidrug transport system, ATPase component.
 
0.483
Your Current Organism:
Paraburkholderia fungorum
NCBI taxonomy Id: 134537
Other names: ATCC BAA-463, Burkholderia fungorum, Burkholderia fungorum Coenye et al. 2001, Burkholderia sp. LMG 16225, Burkholderia sp. LMG 16307, Burkholderia sp. LMG16225, Burkholderia sp. LMG16307, CCUG 31961, CIP 107096, DSM 17061, JCM 21562, LMG 16225, LMG:16225, NBRC 102489, P. fungorum, Paraburkholderia fungorum (Coenye et al. 2001) Sawana et al. 2015, strain Croize P763-2
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