STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OI25_3654merR regulatory family protein; [K] COG0789 Predicted transcriptional regulators. (132 aa)    
Predicted Functional Partners:
cueR-3
cueR: Cu(I)-responsive transcriptional regulator; [K] COG0789 Predicted transcriptional regulators.
  
 
 
 0.782
cueR-2
cueR: Cu(I)-responsive transcriptional regulator; [K] COG0789 Predicted transcriptional regulators.
  
 
 
 0.778
OI25_5663
merR regulatory family protein; [K] COG0789 Predicted transcriptional regulators.
  
 
 
 0.777
OI25_3364
merR regulatory family protein; [K] COG0789 Predicted transcriptional regulators.
  
     0.756
cadR-2
cadR-PbrR: Cd(II)/Pb(II)-responsive transcriptional regulator; [K] COG0789 Predicted transcriptional regulators.
  
     0.754
cadR
cadR-PbrR: Cd(II)/Pb(II)-responsive transcriptional regulator; [K] COG0789 Predicted transcriptional regulators.
  
     0.747
merR
merR: Hg(II)-responsive transcriptional regulator; [K] COG0789 Predicted transcriptional regulators.
  
     0.744
OI25_3371
merR HTH regulatory family protein; [K] COG0789 Predicted transcriptional regulators.
  
   
 0.619
OI25_3655
Dienelactone hydrolase family protein; [R] COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
 
     0.602
OI25_3221
Hypothetical protein.
  
  
 0.515
Your Current Organism:
Paraburkholderia fungorum
NCBI taxonomy Id: 134537
Other names: ATCC BAA-463, Burkholderia fungorum, Burkholderia fungorum Coenye et al. 2001, Burkholderia sp. LMG 16225, Burkholderia sp. LMG 16307, Burkholderia sp. LMG16225, Burkholderia sp. LMG16307, CCUG 31961, CIP 107096, DSM 17061, JCM 21562, LMG 16225, LMG:16225, NBRC 102489, P. fungorum, Paraburkholderia fungorum (Coenye et al. 2001) Sawana et al. 2015, strain Croize P763-2
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