STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pchF4-cresol dehydrogenase [hydroxylating] flavoprotein subunit; [C] COG0277 FAD/FMN-containing dehydrogenases. (525 aa)    
Predicted Functional Partners:
OI25_3958
Hypothetical protein.
       0.717
OI25_3961
Putative lipoprotein; [M] COG4520 Surface antigen.
       0.599
OI25_978
Hypothetical protein; FAD linked oxidase, C-terminal domain protein; [C] COG0277 FAD/FMN-containing dehydrogenases.
  
     0.574
OI25_4270
FAD binding domain protein; [C] COG0277 FAD/FMN-containing dehydrogenases.
  
     0.540
OI25_3579
FAD binding domain protein; [C] COG0277 FAD/FMN-containing dehydrogenases.
  
     0.469
OI25_4678
Hypothetical protein.
  
     0.465
OI25_979
FAD binding domain protein; [C] COG0277 FAD/FMN-containing dehydrogenases.
  
     0.456
OI25_57
Hypothetical protein; FAD linked oxidase, C-terminal domain protein; [C] COG0277 FAD/FMN-containing dehydrogenases.
  
     0.449
OI25_6084
nmrA-like family protein.
  
 
 0.441
OI25_1816
Glutamine amidotransferases class-II family protein; [E] COG0069 Glutamate synthase domain 2.
     
 0.424
Your Current Organism:
Paraburkholderia fungorum
NCBI taxonomy Id: 134537
Other names: ATCC BAA-463, Burkholderia fungorum, Burkholderia fungorum Coenye et al. 2001, Burkholderia sp. LMG 16225, Burkholderia sp. LMG 16307, Burkholderia sp. LMG16225, Burkholderia sp. LMG16307, CCUG 31961, CIP 107096, DSM 17061, JCM 21562, LMG 16225, LMG:16225, NBRC 102489, P. fungorum, Paraburkholderia fungorum (Coenye et al. 2001) Sawana et al. 2015, strain Croize P763-2
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