STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OI25_4416Amino acid permease family protein; [E] COG0531 Amino acid transporters. (482 aa)    
Predicted Functional Partners:
treS
treS_nterm: trehalose synthase; [G] COG0366 Glycosidases.
  
 0.639
glgE
Alpha amylase, catalytic domain protein; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB.
   
 0.637
OI25_4415
Type I phosphodiesterase / nucleotide pyrophosphatase family protein; [P] COG3119 Arylsulfatase A and related enzymes.
   
 
 0.602
OI25_4417
[K] COG2207 AraC-type DNA-binding domain-containing proteins.
 
   
 0.567
OI25_4414
Sulfatase-modifying factor enzyme 1 family protein; [S] COG1262 Uncharacterized conserved protein.
       0.559
OI25_6757
FAD dependent oxidoreductase family protein; [E] COG0665 Glycine/D-amino acid oxidases (deaminating).
 
  
 0.472
OI25_4413
[M] COG3203 Outer membrane protein (porin).
  
    0.453
OI25_4424
Molybdenum cofactor biosynthesis F family protein.
 
   
 0.448
OI25_217
FAD dependent oxidoreductase family protein; [E] COG0665 Glycine/D-amino acid oxidases (deaminating).
 
  
 0.447
Your Current Organism:
Paraburkholderia fungorum
NCBI taxonomy Id: 134537
Other names: ATCC BAA-463, Burkholderia fungorum, Burkholderia fungorum Coenye et al. 2001, Burkholderia sp. LMG 16225, Burkholderia sp. LMG 16307, Burkholderia sp. LMG16225, Burkholderia sp. LMG16307, CCUG 31961, CIP 107096, DSM 17061, JCM 21562, LMG 16225, LMG:16225, NBRC 102489, P. fungorum, Paraburkholderia fungorum (Coenye et al. 2001) Sawana et al. 2015, strain Croize P763-2
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