STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OI25_4446Tetratricopeptide repeat family protein; [R] COG0457 FOG: TPR repeat. (1596 aa)    
Predicted Functional Partners:
OI25_4445
Glycosyl hydrolases 8 family protein; [G] COG3405 Endoglucanase Y.
 
   
 0.964
OI25_4444
Bacterial cellulose synthase subunit; Binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP); Belongs to the AcsB/BcsB family.
 
   
 0.954
bcsA
celA: cellulose synthase catalytic subunit; [M] COG1215 Glycosyltransferases, probably involved in cell wall biogenesis.
 
   
 0.951
yhjQ
cellulose_yhjQ: cellulose synthase operon protein YhjQ; [D] COG1192 ATPases involved in chromosome partitioning.
 
   
 0.915
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
  
 
 0.893
OI25_4440
Cellulose synthase subunit D family protein.
 
   
 0.891
OI25_4441
Hypothetical protein.
  
  
 0.752
OI25_6386
Hypothetical protein.
  
     0.702
OI25_6467
[R] COG2916 DNA-binding protein H-NS.
  
     0.687
OI25_5467
Hypothetical protein.
  
     0.654
Your Current Organism:
Paraburkholderia fungorum
NCBI taxonomy Id: 134537
Other names: ATCC BAA-463, Burkholderia fungorum, Burkholderia fungorum Coenye et al. 2001, Burkholderia sp. LMG 16225, Burkholderia sp. LMG 16307, Burkholderia sp. LMG16225, Burkholderia sp. LMG16307, CCUG 31961, CIP 107096, DSM 17061, JCM 21562, LMG 16225, LMG:16225, NBRC 102489, P. fungorum, Paraburkholderia fungorum (Coenye et al. 2001) Sawana et al. 2015, strain Croize P763-2
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