Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
OI25_2771 | OI25_4704 | OI25_2771 | OI25_4704 | Glycine-zipper containing OmpA-like membrane domain protein. | Putative transmembrane protein. | 0.520 |
OI25_3919 | OI25_4704 | OI25_3919 | OI25_4704 | Catalase family protein; Serves to protect cells from the toxic effects of hydrogen peroxide. | Putative transmembrane protein. | 0.407 |
OI25_3919 | corA-2 | OI25_3919 | OI25_7571 | Catalase family protein; Serves to protect cells from the toxic effects of hydrogen peroxide. | corA: magnesium and cobalt transport protein CorA; [P] COG0598 Mg2+ and Co2+ transporters. | 0.417 |
OI25_4703 | OI25_4704 | OI25_4703 | OI25_4704 | Hypothetical protein. | Putative transmembrane protein. | 0.418 |
OI25_4704 | OI25_2771 | OI25_4704 | OI25_2771 | Putative transmembrane protein. | Glycine-zipper containing OmpA-like membrane domain protein. | 0.520 |
OI25_4704 | OI25_3919 | OI25_4704 | OI25_3919 | Putative transmembrane protein. | Catalase family protein; Serves to protect cells from the toxic effects of hydrogen peroxide. | 0.407 |
OI25_4704 | OI25_4703 | OI25_4704 | OI25_4703 | Putative transmembrane protein. | Hypothetical protein. | 0.418 |
OI25_4704 | OI25_7144 | OI25_4704 | OI25_7144 | Putative transmembrane protein. | Putative aspartate carbamoyltransferase. | 0.453 |
OI25_4704 | OI25_7680 | OI25_4704 | OI25_7680 | Putative transmembrane protein. | Metal ion efflux membrane fusion protein family. | 0.464 |
OI25_4704 | corA-2 | OI25_4704 | OI25_7571 | Putative transmembrane protein. | corA: magnesium and cobalt transport protein CorA; [P] COG0598 Mg2+ and Co2+ transporters. | 0.433 |
OI25_7144 | OI25_4704 | OI25_7144 | OI25_4704 | Putative aspartate carbamoyltransferase. | Putative transmembrane protein. | 0.453 |
OI25_7144 | OI25_7680 | OI25_7144 | OI25_7680 | Putative aspartate carbamoyltransferase. | Metal ion efflux membrane fusion protein family. | 0.686 |
OI25_7680 | OI25_4704 | OI25_7680 | OI25_4704 | Metal ion efflux membrane fusion protein family. | Putative transmembrane protein. | 0.464 |
OI25_7680 | OI25_7144 | OI25_7680 | OI25_7144 | Metal ion efflux membrane fusion protein family. | Putative aspartate carbamoyltransferase. | 0.686 |
corA-2 | OI25_3919 | OI25_7571 | OI25_3919 | corA: magnesium and cobalt transport protein CorA; [P] COG0598 Mg2+ and Co2+ transporters. | Catalase family protein; Serves to protect cells from the toxic effects of hydrogen peroxide. | 0.417 |
corA-2 | OI25_4704 | OI25_7571 | OI25_4704 | corA: magnesium and cobalt transport protein CorA; [P] COG0598 Mg2+ and Co2+ transporters. | Putative transmembrane protein. | 0.433 |