STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OI25_63202OG-Fe(II) oxygenase superfamily protein. (272 aa)    
Predicted Functional Partners:
OI25_6319
CDP-alcohol phosphatidyltransferase family protein; [I] COG0558 Phosphatidylglycerophosphate synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
     0.946
OI25_6321
hpnL: membrane family protein.
 
  
 0.944
OI25_6322
[M] COG1213 Predicted sugar nucleotidyltransferases.
 
   
 0.930
aepX
PEP_mutase: phosphoenolpyruvate mutase; [G] COG2513 PEP phosphonomutase and related enzymes.
 
 
 0.770
aepY
ppyr-DeCO2ase: phosphonopyruvate decarboxylase; [EH] COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase].
 
   
 0.769
OI25_650
[M] COG3203 Outer membrane protein (porin).
  
     0.746
OI25_2890
Helix-turn-helix domain protein; [S] COG1426 Uncharacterized protein conserved in bacteria.
  
    0.712
OI25_7068
Hypothetical protein.
  
     0.691
OI25_4814
Conserved hypothetical protein; [L] COG3293 Transposase and inactivated derivatives.
  
     0.673
OI25_2130
Conserved hypothetical protein; [M] COG3307 Lipid A core - O-antigen ligase and related enzymes.
 
     0.666
Your Current Organism:
Paraburkholderia fungorum
NCBI taxonomy Id: 134537
Other names: ATCC BAA-463, Burkholderia fungorum, Burkholderia fungorum Coenye et al. 2001, Burkholderia sp. LMG 16225, Burkholderia sp. LMG 16307, Burkholderia sp. LMG16225, Burkholderia sp. LMG16307, CCUG 31961, CIP 107096, DSM 17061, JCM 21562, LMG 16225, LMG:16225, NBRC 102489, P. fungorum, Paraburkholderia fungorum (Coenye et al. 2001) Sawana et al. 2015, strain Croize P763-2
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