STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OI25_6619glyoxalase/Bleomycin resistance /Dioxygenase superfamily protein; [E] COG0346 Lactoylglutathione lyase and related lyases. (135 aa)    
Predicted Functional Partners:
OI25_6618
rbsD / FucU transport family protein; [G] COG4154 Fucose dissimilation pathway protein FucU; Belongs to the RbsD / FucU family.
 
    0.736
OI25_7769
mmgE/PrpD family protein; [R] COG2079 Uncharacterized protein involved in propionate catabolism.
 
    0.617
OI25_6617
Hypothetical protein.
       0.613
OI25_7767
mmgE/PrpD family protein; [R] COG2079 Uncharacterized protein involved in propionate catabolism.
 
    0.595
OI25_3907
mmgE/PrpD family protein; [R] COG2079 Uncharacterized protein involved in propionate catabolism.
 
    0.568
OI25_6616
snoaL-like domain protein.
  
    0.546
OI25_6620
SURF4 family protein; [S] COG2259 Predicted membrane protein.
       0.435
OI25_1124
4Fe-4S dicluster domain protein; [C] COG1145 Ferredoxin.
  
  
 0.403
nuoI
NADH-quinone oxidoreductase, chain I family protein; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
  
  
 0.403
OI25_5158
Hypothetical protein; N-terminal half of MaoC dehydratase family protein; [S] COG3777 Uncharacterized conserved protein.
  
    0.401
Your Current Organism:
Paraburkholderia fungorum
NCBI taxonomy Id: 134537
Other names: ATCC BAA-463, Burkholderia fungorum, Burkholderia fungorum Coenye et al. 2001, Burkholderia sp. LMG 16225, Burkholderia sp. LMG 16307, Burkholderia sp. LMG16225, Burkholderia sp. LMG16307, CCUG 31961, CIP 107096, DSM 17061, JCM 21562, LMG 16225, LMG:16225, NBRC 102489, P. fungorum, Paraburkholderia fungorum (Coenye et al. 2001) Sawana et al. 2015, strain Croize P763-2
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