STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OI25_6657[G] COG1874 Beta-galactosidase. (668 aa)    
Predicted Functional Partners:
OI25_5189
Aldose 1-epimerase family protein; Converts alpha-aldose to the beta-anomer.
  
 
 0.923
OI25_1314
Aldose 1-epimerase family protein; [G] COG2017 Galactose mutarotase and related enzymes.
  
 
 0.917
OI25_2010
Aldose 1-epimerase family protein; [G] COG2017 Galactose mutarotase and related enzymes.
  
 
 0.917
OI25_6658
Bacterial extracellular solute-binding family protein; [G] COG1653 ABC-type sugar transport system, periplasmic component.
 
  
 0.904
OI25_860
Kelch motif family protein.
     
 0.901
OI25_6660
Binding--dependent transport system inner membrane component family protein; [G] COG0395 ABC-type sugar transport system, permease component.
 
  
 0.783
OI25_6656
ABC transporter family protein; [G] COG3839 ABC-type sugar transport systems, ATPase components; Belongs to the ABC transporter superfamily.
     
 0.765
OI25_6659
Binding--dependent transport system inner membrane component family protein; [G] COG1175 ABC-type sugar transport systems, permease components.
 
  
 0.754
OI25_6655
Bacterial regulatory s, lacI family protein; [K] COG1609 Transcriptional regulators.
 
   
 0.600
OI25_3089
[G] COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases; Belongs to the glycosyl hydrolase 31 family.
 
  
 0.597
Your Current Organism:
Paraburkholderia fungorum
NCBI taxonomy Id: 134537
Other names: ATCC BAA-463, Burkholderia fungorum, Burkholderia fungorum Coenye et al. 2001, Burkholderia sp. LMG 16225, Burkholderia sp. LMG 16307, Burkholderia sp. LMG16225, Burkholderia sp. LMG16307, CCUG 31961, CIP 107096, DSM 17061, JCM 21562, LMG 16225, LMG:16225, NBRC 102489, P. fungorum, Paraburkholderia fungorum (Coenye et al. 2001) Sawana et al. 2015, strain Croize P763-2
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