Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
OI25_314 | OI25_6693 | Pyridoxamine 5'-phosphate oxidase family protein; [R] COG3576 Predicted flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase. | Carboxymuconolactone decarboxylase family protein; [S] COG2128 Uncharacterized conserved protein. | 0.407 |
OI25_5971 | OI25_6693 | Bacterial regulatory s, tetR family protein; [K] COG1309 Transcriptional regulator. | Carboxymuconolactone decarboxylase family protein; [S] COG2128 Uncharacterized conserved protein. | 0.598 |
OI25_6692 | OI25_6693 | Hypothetical protein. | Carboxymuconolactone decarboxylase family protein; [S] COG2128 Uncharacterized conserved protein. | 0.503 |
OI25_6693 | OI25_314 | Carboxymuconolactone decarboxylase family protein; [S] COG2128 Uncharacterized conserved protein. | Pyridoxamine 5'-phosphate oxidase family protein; [R] COG3576 Predicted flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase. | 0.407 |
OI25_6693 | OI25_5971 | Carboxymuconolactone decarboxylase family protein; [S] COG2128 Uncharacterized conserved protein. | Bacterial regulatory s, tetR family protein; [K] COG1309 Transcriptional regulator. | 0.598 |
OI25_6693 | OI25_6692 | Carboxymuconolactone decarboxylase family protein; [S] COG2128 Uncharacterized conserved protein. | Hypothetical protein. | 0.503 |
OI25_6693 | OI25_6694 | Carboxymuconolactone decarboxylase family protein; [S] COG2128 Uncharacterized conserved protein. | Helix-turn-helix family protein; [K] COG1396 Predicted transcriptional regulators. | 0.503 |
OI25_6693 | OI25_6780 | Carboxymuconolactone decarboxylase family protein; [S] COG2128 Uncharacterized conserved protein. | Bacterial regulatory s, tetR family protein; [K] COG1309 Transcriptional regulator. | 0.644 |
OI25_6693 | OI25_6786 | Carboxymuconolactone decarboxylase family protein; [S] COG2128 Uncharacterized conserved protein. | Redoxin family protein; [O] COG1225 Peroxiredoxin. | 0.492 |
OI25_6693 | OI25_6909 | Carboxymuconolactone decarboxylase family protein; [S] COG2128 Uncharacterized conserved protein. | Bacterial regulatory s, tetR family protein; [K] COG1309 Transcriptional regulator. | 0.603 |
OI25_6694 | OI25_6693 | Helix-turn-helix family protein; [K] COG1396 Predicted transcriptional regulators. | Carboxymuconolactone decarboxylase family protein; [S] COG2128 Uncharacterized conserved protein. | 0.503 |
OI25_6780 | OI25_6693 | Bacterial regulatory s, tetR family protein; [K] COG1309 Transcriptional regulator. | Carboxymuconolactone decarboxylase family protein; [S] COG2128 Uncharacterized conserved protein. | 0.644 |
OI25_6786 | OI25_6693 | Redoxin family protein; [O] COG1225 Peroxiredoxin. | Carboxymuconolactone decarboxylase family protein; [S] COG2128 Uncharacterized conserved protein. | 0.492 |
OI25_6909 | OI25_6693 | Bacterial regulatory s, tetR family protein; [K] COG1309 Transcriptional regulator. | Carboxymuconolactone decarboxylase family protein; [S] COG2128 Uncharacterized conserved protein. | 0.603 |