STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OI25_6743Conserved hypothetical protein; [S] COG4312 Uncharacterized protein conserved in bacteria. (242 aa)    
Predicted Functional Partners:
OI25_5864
Hypothetical protein.
 
     0.762
OI25_5863
SMP-30/Gluconolaconase/LRE-like region family protein.
 
     0.755
OI25_6616
snoaL-like domain protein.
  
     0.503
OI25_3668
Conserved hypothetical protein; [R] COG5516 Conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding.
  
     0.464
OI25_3589
Hypothetical protein.
 
     0.459
OI25_1090
Hypothetical protein.
  
     0.456
OI25_7461
Conserved hypothetical protein; [S] COG3652 Predicted outer membrane protein.
  
     0.429
OI25_4372
Glyoxalase-like domain protein; [S] COG2764 Uncharacterized protein conserved in bacteria.
 
     0.424
OI25_5991
YCII-related domain protein; [S] COG3795 Uncharacterized protein conserved in bacteria.
 
    0.419
Your Current Organism:
Paraburkholderia fungorum
NCBI taxonomy Id: 134537
Other names: ATCC BAA-463, Burkholderia fungorum, Burkholderia fungorum Coenye et al. 2001, Burkholderia sp. LMG 16225, Burkholderia sp. LMG 16307, Burkholderia sp. LMG16225, Burkholderia sp. LMG16307, CCUG 31961, CIP 107096, DSM 17061, JCM 21562, LMG 16225, LMG:16225, NBRC 102489, P. fungorum, Paraburkholderia fungorum (Coenye et al. 2001) Sawana et al. 2015, strain Croize P763-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.