Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
OI25_770 | OI25_771 | Rhodanese-like domain protein; [P] COG0607 Rhodanese-related sulfurtransferase. | type_I_sec_TolC: type I secretion outer membrane, TolC family protein; [MU] COG1538 Outer membrane protein. | 0.769 |
OI25_770 | OI25_772 | Rhodanese-like domain protein; [P] COG0607 Rhodanese-related sulfurtransferase. | Hypothetical protein. | 0.474 |
OI25_770 | OI25_773 | Rhodanese-like domain protein; [P] COG0607 Rhodanese-related sulfurtransferase. | Hypothetical protein. | 0.460 |
OI25_771 | OI25_770 | type_I_sec_TolC: type I secretion outer membrane, TolC family protein; [MU] COG1538 Outer membrane protein. | Rhodanese-like domain protein; [P] COG0607 Rhodanese-related sulfurtransferase. | 0.769 |
OI25_771 | OI25_772 | type_I_sec_TolC: type I secretion outer membrane, TolC family protein; [MU] COG1538 Outer membrane protein. | Hypothetical protein. | 0.492 |
OI25_771 | OI25_773 | type_I_sec_TolC: type I secretion outer membrane, TolC family protein; [MU] COG1538 Outer membrane protein. | Hypothetical protein. | 0.431 |
OI25_772 | OI25_770 | Hypothetical protein. | Rhodanese-like domain protein; [P] COG0607 Rhodanese-related sulfurtransferase. | 0.474 |
OI25_772 | OI25_771 | Hypothetical protein. | type_I_sec_TolC: type I secretion outer membrane, TolC family protein; [MU] COG1538 Outer membrane protein. | 0.492 |
OI25_772 | OI25_773 | Hypothetical protein. | Hypothetical protein. | 0.673 |
OI25_772 | OI25_775 | Hypothetical protein. | Hypothetical protein. | 0.405 |
OI25_773 | OI25_770 | Hypothetical protein. | Rhodanese-like domain protein; [P] COG0607 Rhodanese-related sulfurtransferase. | 0.460 |
OI25_773 | OI25_771 | Hypothetical protein. | type_I_sec_TolC: type I secretion outer membrane, TolC family protein; [MU] COG1538 Outer membrane protein. | 0.431 |
OI25_773 | OI25_772 | Hypothetical protein. | Hypothetical protein. | 0.673 |
OI25_773 | OI25_775 | Hypothetical protein. | Hypothetical protein. | 0.475 |
OI25_775 | OI25_772 | Hypothetical protein. | Hypothetical protein. | 0.405 |
OI25_775 | OI25_773 | Hypothetical protein. | Hypothetical protein. | 0.475 |