STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APD31370.1Zinc carboxypeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1108 aa)    
Predicted Functional Partners:
cls
Cardiolipin synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the phospholipase D family. Cardiolipin synthase subfamily.
    
 0.668
APD31759.1
Aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.601
APD31371.1
Phosphinothricin acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.600
scpI
Peptidase S8; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.448
APD32245.1
Peptidase S8; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.448
APD32021.1
F0F1 ATP synthase subunit C; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.440
APD32723.1
Dipeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.417
APD31369.1
Alpha-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.412
APD31323.1
SPFH domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.408
APD31368.1
Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.407
Your Current Organism:
Streptococcus iniae
NCBI taxonomy Id: 1346
Other names: ATCC 29178, CCUG 27303, CIP 102508, DSM 20576, LMG 14520, LMG:14520, S. iniae, Streptococcus shiloi, strain PW
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.