STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKS30922.1Secretion protein EccC; Derived by automated computational analysis using gene prediction method: Protein Homology. (1322 aa)    
Predicted Functional Partners:
AKS30916.1
Secretion protein EccD; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.999
AKS30923.1
Secretion protein EccB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.999
AKS30915.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.993
AKS31638.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.971
AKS36029.1
Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.944
AKS31637.1
Type VII secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.939
AKS30924.1
Secretion protein EccA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.924
AKS30921.1
Cell motility protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.899
AKS30920.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.886
AKS30917.1
Secretion protein EspG; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.871
Your Current Organism:
Mycolicibacterium goodii
NCBI taxonomy Id: 134601
Other names: ATCC 700504, CIP 106349, DSM 44492, JCM 12689, M. goodii, Mycobacterium goodii, strain MO69
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.