STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKS33656.1NADP oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (208 aa)    
Predicted Functional Partners:
AKS30870.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.703
AKS30864.1
NADP oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.648
AKS33657.1
MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.584
AKS33655.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.579
AKS31686.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.476
AKS33410.1
Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.438
AKS34451.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.438
AKS30743.1
Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.405
Your Current Organism:
Mycolicibacterium goodii
NCBI taxonomy Id: 134601
Other names: ATCC 700504, CIP 106349, DSM 44492, JCM 12689, M. goodii, Mycobacterium goodii, strain MO69
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