STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKS33757.1Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (521 aa)    
Predicted Functional Partners:
AKS33609.1
Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.583
AKS33547.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.576
AKS35089.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.576
AKS31339.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.575
AKS36155.1
Secretion protein EccK; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.572
AKS32332.1
Sulfotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.572
AKS36522.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.572
AKS34573.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.572
AKS35381.1
Tetratricopeptide repeat protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.572
AKS36483.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.567
Your Current Organism:
Mycolicibacterium goodii
NCBI taxonomy Id: 134601
Other names: ATCC 700504, CIP 106349, DSM 44492, JCM 12689, M. goodii, Mycobacterium goodii, strain MO69
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.