STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKS34122.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (561 aa)    
Predicted Functional Partners:
AKS34123.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.790
AKS34124.1
TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.752
AKS31608.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.723
AKS34934.1
Ethanolamine utilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.696
AKS34120.1
Alpha-amylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.682
AKS34121.1
Cytidine deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.682
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
  
 0.666
AKS34302.1
Peptidase S15; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.658
AKS32447.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.650
AKS36570.1
Peptidase S15; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.640
Your Current Organism:
Mycolicibacterium goodii
NCBI taxonomy Id: 134601
Other names: ATCC 700504, CIP 106349, DSM 44492, JCM 12689, M. goodii, Mycobacterium goodii, strain MO69
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.