STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KXA17157.1KEGG: mct:MCR_0505 1.5e-104 amino acid transport protein K03310; Psort location: CytoplasmicMembrane, score: 10.00. (467 aa)    
Predicted Functional Partners:
KXA16718.1
Acetyltransferase, GNAT family; KEGG: fnu:FN0056 1.7e-16 acetyltransferase K00680; Psort location: Cytoplasmic, score: 8.96.
 
      0.739
KXA17158.1
OmpA family protein; KEGG: lby:Lbys_1603 2.7e-17 v-type h(+)-translocating pyrophosphatase; K15987 K(+)-stimulated pyrophosphate-energized sodium pump; Psort location: OuterMembrane, score: 9.95.
       0.462
KXA12471.1
Chloride transporter, ClC family; KEGG: cpr:CPR_1400 1.5e-88 chloride channel protein K01529; Psort location: CytoplasmicMembrane, score: 10.00.
   
    0.415
Your Current Organism:
Fusobacterium equinum
NCBI taxonomy Id: 134605
Other names: DSM 17476, F. equinum, Fusibacterium equinum, Fusobacterium equinum Dorsch et al. 2001, Fusobacterium equorum, JCM 11174, NCTC 13176, VPB 4027
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.